Fungal Bioinformatics

0.1. Brief introduction to polyphasic taxonomy
0.2 Basecalling of ONT reads
1. Data Quality Check (QC)
2. Data Trimming
3. Genome assembly
4. Genome Assembly QC
5. Polishing the assembly
5.1 Dealing with heterozygous genomes
6. Genome annotation
7. Comparative genomics
8. Phylogenomics
Help page for technical stuff
References

Fungal Bioinformatics

7. Comparative genomics
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7. Comparative genomics

NOTE: This project is under active development. This is a placeholder for using funannotate for comparative genomics

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